Commit 846653a0 authored by Peter Kruczkiewicz's avatar Peter Kruczkiewicz

updated CHANGELOG.md and UPGRADING.md

parent a02127a0
Pipeline #7607 canceled with stage
......@@ -15,6 +15,7 @@ Changes
* [UI]: Fixed error where synchronizing sequence files could lead to truncated files without generating an error. (0.22.3)
* [UI]: Adding NCBI SRA accession to sample metadata when uploading data to NCBI.
* [Developer]: Updated FastQC to 0.11.7.
* [Workflow]: Updated the AssemblyAnnotation pipeline to v0.5 and the AssemblyAnnotationCollection pipeline to v0.4. Both pipelines now use Shovill for assembly and QUAST for assembly quality assessment in addition to Prokka for annotation.
0.21.0 to 0.22.0
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......@@ -8,6 +8,7 @@ upgrading IRIDA that cannot be automated.
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* A new configuration value is avaliable to display a warning on analysis result and metadata pages to communicate that an analysis result should be considered preliminiary. Add a warning message `irida.analysis.warning` in `/etc/irida/web.conf` to display on all analysis result and metadata pages.
* New Spring profiles are available for running IRIDA in a multi-server mode. This will help distribute the load in high-usage installations. See the documentation for more details at https://irida.corefacility.ca/documentation/administrator/web/#multi-web-server-configuration.
* The [AssemblyAnnotation](https://irida.corefacility.ca/documentation/administrator/galaxy/pipelines/assembly-annotation/) and [AssemblyAnnotationCollection](https://irida.corefacility.ca/documentation/administrator/galaxy/pipelines/assembly-annotation-collection/) pipelines have been upgraded to make use of [shovill](https://github.com/tseemann/shovill) for assembly and [QUAST](http://quast.sourceforge.net/quast.html) for assembly quality assessment. Please ensure that the `shovill` and `quast` Galaxy tools are installed for these pipelines. If you haven't already, please follow [the instructions for installing `shovill`](https://irida.corefacility.ca/documentation/administrator/galaxy/pipelines/assembly-annotation/#address-shovill-related-issues) and see the instructions for upgrading the [SISTR](https://irida.corefacility.ca/documentation/administrator/galaxy/pipelines/sistr/) pipeline from 0.21.0 to 0.22.0 for more info.
0.21.0 to 0.22.0
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