Commit 1d0d8254 authored by Aaron Petkau's avatar Aaron Petkau

Updated tree comparison links/added links to trees

parent 395073be
Pipeline #5267 passed with stage
in 3 seconds
......@@ -22,10 +22,10 @@ As an additional comparison to the default tree produced by SNVPhyl, we extracte
In both cases, the SNVPhyl tree is tree 1 on the left while the tree available from Microreact - <https://microreact.org/project/N1TRn11L> is tree 2 on the right.
| Case | SNVs used | % core | Docker runtime <br/> (hrs) | Cluster runtime <br/> (hrs) | Phylogenetic tree comparison |
|:--------------------------------------------------:|:---------:|:------:|:--------------------------:|:---------------------------:|:----------------------------:|
| Default <br/> (2 SNVs in 500 bp) | 1111 | 36.81 | 8.23 | 2.22 | [Comparison][1-tree-2-500] |
| Gubbins\* <br/> (all positions detected by SNVPhyl)| - | - | - | - | [Comparison][1-tree-gubbins] |
| Case | SNVs used | % core | Docker runtime <br/> (hrs) | Cluster runtime <br/> (hrs) | Phylogenetic tree comparison |
|:--------------------------------------------------:|:---------:|:------:|:--------------------------:|:---------------------------:|:-----------------------------------------------------------------------------------------------------:|
| Default <br/> (2 SNVs in 500 bp) | 1111 | 36.81 | 8.23 | 2.22 | [Comparison][1-tree-2-500] ([SNVPhyl][snvphyl-tree], [Microreact][microreact-tree]) |
| Gubbins\* <br/> (all positions detected by SNVPhyl)| - | - | - | - | [Comparison][1-tree-gubbins] ([SNVPhyl/Gubbins][snvphyl-gubbins-tree], [Microreact][microreact-tree]) |
[docker version of SNVPhyl]: ../install/docker
[SNVPhyl manuscript]: http://biorxiv.org/content/early/2016/12/10/092940
......@@ -33,5 +33,8 @@ In both cases, the SNVPhyl tree is tree 1 on the left while the tree available f
[Microreact]: https://microreact.org
[Gubbins]: https://sanger-pathogens.github.io/gubbins/
[methods]: https://github.com/phac-nml/snvphyl-galaxy/tree/development/docs/evaluation/benchmarking-methods/
[1-tree-2-500]: http://phylo.io/#db3f0e933657efbab5b732f19c3b3276%23e5f863ba72a3551780bdebc610e87dd1
[1-tree-gubbins]: http://phylo.io/#009e855b17db1ec897c19791c14f4ea6%235ca06bb267033a22112c202c82e981ff
[1-tree-2-500]: http://phylo.io/#d96fb439be6faefb9b7ed7fd75332f46-713df4fc0a529b8d31254c7077b3f6c7
[1-tree-gubbins]: http://phylo.io/#ecc0d535d3ba18651beedb0ac516076b-b0df11fb955a8b4955044174a60ed58d
[snvphyl-tree]: results/snvphyl-2-500-filter.nwk
[snvphyl-gubbins-tree]: results/gubbins-all-positions.nwk
[microreact-tree]: results/microreact-s-pneumo.nwk
((((DCC2623:46.566563,SPN4683:37.9464):0.003318,(((LMG2302:47.970795,(DG_23:34.2523,(BS_06:16.094574,DG_25:31.874584):2.060754):11.842755):16.228685,SN11917:26.336596):10.928603,(S-112:28.61544,((((LMG867:1.136279,LMG869:0.003318):12.539066,LMG1435:27.440691):0.003318,LMG1250:14.756447):0.003318,S-044:38.978367):0.003318):19.516321):31.122868):5.975345,((((LMG1978:36.887764,(((LMG690:9.699422,SPN8332:0.960317):31.620155,PT2236:14.693143):12.411572,PT3104:45.198795):1.341286):8.763502,(((((9901+13020:22.786863,0001+05003:28.506081):0.003318,((9712+30001:4.117985,9802+26112:4.110255):8.253235,(9909+21117:0.003318,(0107+17127:0.003318,(0101+26271:1.025354,0102+01171:2.054626):2.052441):4.104441):5.141433):7.199445):0.003318,(spnIC28:3.105394,(9611+04103:3.074375,0211+13275:13.52776):8.24388):2.046689):1.020378,((9707+14101:10.294945,((9912+17151:24.896355,(((0202+01134:2.063383,((0505+04001:5.145118,0507+08068:0.003318):1.026065,0407+30157:2.18966):5.47785):2.186824,(0506+29167:5.150043,0503+03063:6.182164):4.113935):2.180291,0005+24045:11.428425):3.286477):2.173599,((0111+21110:22.727453,(9812+11187:11.301742,9905+21046:11.454873):4.132311):1.122745,(9702+03174:5.156175,9511+06158:1.228384):9.860402):0.003318):0.003318):3.306744,(((9512+07034:5.170368,(9706+10167:2.066886,(((9903+09147:4.137638,0006+20010:3.867055):0.003318,0108+03050:6.591891):1.376261,9701+10122:1.033671):0.003318):3.259781):6.550231,(((9612+28032:15.489326,spnIC19:2.062772):0.003318,((9609+24019:7.281959,9705+05087:2.067054):6.180264,9603+12093:7.21944):0.003318):2.051665,(9906+15160:25.984673,((spnIC2:4.144838,spnIC41:3.09922):0.003318,(((spnIC425:0.003318,spnIC419:2.05876):4.300285,((0012+25031:2.185035,(0109+28217:2.079793,0203+19212:3.289762):1.097212):12.433593,spnIC426:1.047382):0.003318):18.979351,9807+09096:12.437764):0.995588):1.006647):2.062386):3.0692):1.074768,(spnIC55:1.057853,((spnIC174:1.027456,(spnIC178:0.003318,(spnIC197:4.136887,spnIC195:2.056338):1.119762):0.003318):11.205776,(((spnIC141:11.385371,(spnIC43:2.070402,(spnIC54:3.096819,(spnIC57:0.003318,(spnIC58:1.029614,((((0205+05018:25.898573,spnIC187:1.029555):0.003318,spnIC192:5.153316):10.259486,((((0003+13150:14.496548,9711+04135:4.128841):2.578655,spnIC210:7.295291):4.786509,spnIC52:1.031974):2.053722,spnIC6:3.104809):0.003318):2.037768,spnIC59:1.032586):0.003318):0.003318):0.003318):2.585474):0.100488):1.375661,((9703+24150:13.499961,spnIC176:3.154829):3.096754,(spnIC203:9.379703,((spnIC432:21.268841,(9601+30166:1.017446,(spnIC434:5.984298,(0206+21189:6.584658,(0106+11154:1.042142,(0501+31089:7.656604,0301+23540:1.034148):4.459196):2.203251):9.388348):2.135682):4.310735):1.424504,spnIC38:3.100566):0.003318):0.003318):3.190466):0.003318,(spnIC42:0.003318,((((((spnIC49:0.003318,((((spnIC190:3.60394,(9607+10105:4.111527,9602+15128:4.110343):7.210325):3.594913,(9806+08086:5.164334,9908+13028:17.628178):4.10637):0.003318,((0207+15090:0.003318,0509+09128:10.350466):11.381715,(9809+25147:5.159433,(9801+23240:1.028595,(0009+01095:8.280419,9907+14172:1.029014):0.003318):5.149509):13.463527):0.003318):1.021285,((9803+09178:1.025081,9808+20015:2.06179):15.495198,((9605+07141:9.301047,0011+09030:17.708967):4.098154,(9811+05053:15.070313,((spnIC463:7.201485,(0302+20271:11.3303,(((0508+26122:11.361805,0412+17021:1.021312):3.074309,(0209+24059:1.025581,0502+25231:1.036063):0.003318):3.073062,(0208+13020:2.061008,0105+29173:7.246023):0.003318):2.038239):9.256783):6.163875,((0409+02133:12.455864,0212+05159:2.062943):0.003318,(9911+18139:3.102467,(0303+13263:1.031722,0112+27129:2.068436):1.031696):0.003318):3.092688):2.047337):0.003318):0.003318):1.363837):0.063243):0.003318,9708+26128:42.981197):0.003318,spnIC10:6.2827):0.003318,9608+02116:12.401075):0.217532,spnIC48:1.039192):0.071783,spnIC51:1.032602):0.989613):1.357065):0.003318):0.003318):1.662753):3.90726):0.003318):4.146478,SPN13151:17.57683):4.470764):38.364452,29_PMEN2:42.04723):2.737527,(((SN11927:1.175174,SPN11926:0.003318):43.548244,(LMG2062:31.55699,LMG2050:35.920227):7.830463):9.075951,(LMG2290:61.421009,((spnSP681:19.498032,LMG2888:59.326744):0.003318,((DCC2613:26.167065,SN26575:32.549927):4.311045,(670-6B :23.347349,((spnSP522:7.541683,(SPN3402:14.028181,((LMG2230:21.601597,LMG2926:31.69561):5.962067,(LMG3367:56.567883,LMG2311:36.364933):0.620038):29.344244):1.026951):0.003318,(((1422-00:31.284613,((LMG90:1.249026,6575-07:0.003318):40.367386,1014-00:35.426037):0.003318):16.382956,((((K01_071205:24.137314,K01_071218:33.164116):3.118711,((K13_0820:24.811281,((K13_0810:3.428456,K13_0913:6.866298):5.721868,K13_0827:8.043688):11.510936):0.003318,(K13_082:20.938208,K13_0940:29.253601):1.466655):12.047591):0.003318,K01_071280:20.62841):6.483181,(LMG759:47.580292,(LMG804:11.914555,LMG1417:18.462282):15.27831):2.197776):4.313579):8.648494,SPN13522:48.468822):0.003318):1.167977):0.003318):2.348979):7.057722):3.770338):5.635795):2.235601):1.852083,((SPN4901:50.325512,((((SPN2906:30.474499,(((PT3026:6.469877,PT1175:1.205787):33.384415,(PT3536:25.183746,(PT1430:1.142708,PT582:0.003318):20.718002):2.178599):24.83647,SN33007:104.135162):0.898211):0.003318,SPN4488:29.358438):5.31659,(SPN13633:29.116449,SPN22809:32.058575):52.46487):23.297438,(((DCC1738:67.614098,(DCC1902:17.557215,PT76:22.299049):41.619869):0.003318,(DCC1524:30.3645,(SPN4000:37.040993,SPN4876:20.752998):0.67406):44.272022):3.460601,(SN34677:62.563313,SPN22664:56.152386):11.816236):0.003318):3.884257):32.683445,((spnIC104:3.106279,(spnIC100:4.147209,(spnIC139:2.068935,(spnIC145:1.032495,spnIC161:11.597505):0.003318):0.003318):6.302431):6.284596,spnIC116:9.389223):27.920397):0.0):0.0;
((((((((((LMG2888:0.0171500124238,670-6B :0.00663320996113):0.00197846768746,(SN26575:0.00911803518348,DCC2613:0.00801281166246):0.00187854412904):0.000546331329339,((SPN13522:0.0188538783799,((((LMG759:0.0161074403234,(LMG804:0.00181604419025,LMG1417:0.00553559006119):0.00459816768988):0.000862337053013,(K01_071280:0.00805790927981,((K01_071218:0.0103925594391,K01_071205:0.00657861372726):0.00119951287831,(K13_0820:0.00967711298776,((K13_0940:0.0096066446975,K13_082:0.00869651435877):0.00071039211812,(K13_0827:0.00266042162362,(K13_0913:0.00197993477171,K13_0810:0.000988068981942):0.00170272810855):0.00550910624588):8.79158031339e-7):0.0052296110637):8.79158031339e-7):0.00274121757874):0.00150073869443,(1014-00:0.01063698562,((LMG90:0.000328976779739,6575-07:8.79158031339e-7):0.0126220202638,1422-00:0.01032383423):8.79158031339e-7):0.00341688104634):0.0027576725905,((LMG2230:0.00584910980923,LMG2926:0.00588618737826):0.00158937191286,(LMG3367:0.016193762369,LMG2311:0.0109033070658):0.000139942322003):0.00884359802748):8.79158031339e-7):8.79158031339e-7,(spnSP522:0.00214248050214,SPN3402:0.00455775056968):0.000752953164306):0.00070251768511):8.79158031339e-7,spnSP681:0.0052372549935):0.00260127214861,LMG2290:0.0198866107293):0.00231336831874,((SN11927:0.000993632207968,SPN11926:8.79158031339e-7):0.0144876784988,(LMG2050:0.015806523358,LMG2062:0.0109799163637):0.00264611733156):0.00533468596162):0.00133896026487,(((((((((spnIC52:8.79158031339e-7,((0003+13150:0.00357439945119,9711+04135:0.00118449847455):0.000686464655119,spnIC210:0.00238793440794):0.00137073231928):0.000878525607384,((9707+14101:0.00295802912994,(((9812+11187:0.00297233871958,9905+21046:0.00353313897463):0.00117970933444,0111+21110:0.00504918677892):0.000297891881517,((9702+03174:0.00206838444885,9511+06158:0.000293132134528):0.00235595727043,(9912+17151:0.00775378297042,(0005+24045:0.002514718685,((0506+29167:0.00177551024144,0503+03063:0.00177517044025):0.00118008315528,(((0505+04001:0.0011803579092,0507+08068:8.79158031339e-7):0.000293567292572,0407+30157:0.000885547196105):0.00117937471909,0202+01134:0.000590838853637):0.000588583947052):0.000747204620956):0.00121053352803):0.000799926846829):8.79158031339e-7):8.79158031339e-7):0.0009305866523,((spnIC174:8.79158031339e-7,(spnIC178:0.000324295988673,(spnIC197:0.00119265330411,spnIC195:0.000590390414603):0.000590502479742):8.79158031339e-7):0.00292122482148,((spnIC54:0.000886894180631,(spnIC43:0.000595067034663,spnIC55:0.000304763692499):8.79158031339e-7):8.79158031339e-7,(spnIC59:0.000295371423528,spnIC51:0.000590787060125):8.79158031339e-7):8.79158031339e-7):8.79158031339e-7):8.79158031339e-7):0.000292102223804,(((spnIC42:8.79158031339e-7,((spnIC10:0.000599213228797,spnIC48:0.000297567572088):8.79158031339e-7,spnIC49:8.79158031339e-7):8.79158031339e-7):8.79158031339e-7,(((((0011+09030:0.00475639891247,9605+07141:0.00267024377247):0.00117198725056,((0409+02133:0.00297105485297,((0112+27129:0.000592256111722,0303+13263:0.000590768392872):0.000294825580905,(9911+18139:0.000889393164458,0212+05159:0.000591005973637):8.79158031339e-7):8.79158031339e-7):0.000881760019581,(spnIC463:0.00206792188896,(0302+20271:0.00236024882535,(0208+13020:0.000885078444584,(0105+29173:0.00147939291369,(0209+24059:0.000294428952746,((0508+26122:0.00325924425435,0412+17021:0.000294147186408):0.000588472429779,0502+25231:0.000295576288005):0.000293518003903):0.00117572199281):8.79158031339e-7):0.000585608609573):0.00295025693677):0.000880104003235):0.000585421415635):8.79158031339e-7,(9811+05053:0.00445091657028,(9808+20015:0.000590776836647,9803+09178:0.000293679665884):0.00415990482845):0.000274167211954):0.000292299275423,(9608+02116:0.00358426129964,9708+26128:0.0104670200908):0.000253300378165):8.79158031339e-7,((0207+15090:8.79158031339e-7,0509+09128:0.00324629730336):0.00324435583576,((spnIC190:0.000588619716544,(9602+15128:0.00117463423702,9607+10105:0.00147260001983):0.00235849675292):0.000880445291611,((9908+13028:0.00562125940305,9806+08086:0.00147782535302):0.00123403521708,(9809+25147:0.00147841614076,(0009+01095:0.00177947539025,(9801+23240:0.000295402045192,9907+14172:0.000295146197122):8.79158031339e-7):0.00147807155937):0.0041579097194):8.79158031339e-7):8.79158031339e-7):0.000292422808497):8.79158031339e-7):0.000291394377381,(spnIC141:0.00265411492968,(spnIC57:8.79158031339e-7,((spnIC203:0.00238730387757,((((spnIC434:0.00119470898296,(0206+21189:0.00179155299264,((0301+23540:0.000327465409392,0501+31089:0.00234838645896):0.00119011778452,0106+11154:0.000329275123383):0.000855587713246):0.002083558904):0.000584878801811,9601+30166:0.000291848321718):0.00146912097068,(spnIC176:0.000904687964272,9703+24150:0.0047446038049):0.000882130186769):0.000388950971294,spnIC432:0.00593966786839):8.79158031339e-7):8.79158031339e-7,spnIC38:0.000590175158077):0.000776588998839):8.79158031339e-7):8.79158031339e-7):8.79158031339e-7):0.000293753360111,spnIC58:0.00029540809578):8.79158031339e-7,(((((9609+24019:0.00178247825517,9705+05087:0.000885387731839):0.00176922468389,9603+12093:0.00236497002736):8.79158031339e-7,(9612+28032:0.00413903012364,spnIC19:0.000394078578077):8.79158031339e-7):0.000781075032953,(9906+15160:0.00744109833079,((9807+09096:0.00354185048805,(spnIC426:0.000301535116982,((0012+25031:0.000884406121694,(0203+19212:0.00147422256606,0109+28217:0.00059290012209):0.000294471093483):0.00124746034239,(spnIC425:8.79158031339e-7,spnIC419:0.000882487797641):0.000779848773746):0.000415971461946):0.00371943718157):0.000286572123354,(spnIC2:0.000886461880223,spnIC41:0.000886552433044):8.79158031339e-7):0.000287724219178):0.000587621711955):0.000875782333117,(9512+07034:0.00177828090219,((9701+10122:8.79158031339e-7,(0108+03050:0.00118722689665,(0006+20010:0.000891915503566,9903+09147:0.001186495045):8.79158031339e-7):0.000295522567919):8.79158031339e-7,9706+10167:0.000893223767651):0.0014758682625):0.00177661774088):0.000290887500092):8.79158031339e-7,((((0205+05018:0.00652744122813,(spnIC192:0.00177303083922,spnIC187:0.00029548493739):0.00027735693905):0.00236932018153,9901+13020:0.00564829204306):0.000871416963657,(spnIC6:0.000295698988224,(((0107+17127:0.000293939738254,(0102+01171:0.000588217753912,0101+26271:0.000293175048612):0.000586592637807):0.00117381937719,9909+21117:8.79158031339e-7):0.00176367001483,(9712+30001:0.00118235684735,9802+26112:0.00117606299917):0.00236192069558):0.00176438976443):0.000292459634139):8.79158031339e-7,((spnIC28:0.00106702586333,(0211+13275:0.00253942979438,9611+04103:0.000879548439393):0.00250465665214):0.000701485625218,0001+05003:0.00872236482333):8.79158031339e-7):0.000291323483991):0.00117485018607,SPN13151:0.00505795038436):0.00116253279154,(LMG1978:0.0129772698638,(PT3104:0.012086880136,((SPN8332:0.000600325170844,LMG690:0.00122489602369):0.0101791632826,PT2236:0.0040157543344):0.0047917068085):0.000266886943466):0.00374205235748):0.0112102945799,29_PMEN2:0.0124791067134):0.00034857506578):0.000351976459817,((SPN4683:0.011732767298,DCC2623:0.0118675917219):0.000215447460098,((S-044:0.0103064285927,(S-112:0.00842415395081,(LMG1250:0.00353215214372,((LMG869:8.79158031339e-7,LMG867:0.000751411873547):0.00377203117999,LMG1435:0.00886323648364):8.79158031339e-7):8.79158031339e-7):8.79158031339e-7):0.0101811189864,((LMG2302:0.0130213041898,((DG_25:0.00879329520366,BS_06:0.00357511247738):0.00065221710065,DG_23:0.0102741567856):0.00318888325553):0.00413810419278,SN11917:0.00695224328849):0.00514228611892):0.00825628351788):0.00078252248766):8.79158031339e-7,(spnIC116:0.0026966794533,(spnIC104:0.000894112203557,((spnIC139:0.000593898657065,(spnIC145:8.79158031339e-7,spnIC161:0.00296619310439):0.000606715158857):8.79158031339e-7,spnIC100:0.000596174717008):0.00217606876129):0.0021709971282):0.00849358887697):0.0105854304699,(((SPN22809:0.0117292715824,SPN13633:0.00765356062215):0.0153410953333,(((((PT1430:0.00031993667747,PT582:0.000316889874935):0.00662671286057,PT3536:0.00924385257969):0.00094191132002,(PT1175:0.000329628868817,PT3026:0.00212036491278):0.0106199461553):0.00703764303892,(SN33007:0.0297836027647,SPN4488:0.00904847420855):8.79158031339e-7):8.79158031339e-7,SPN2906:0.00876995798965):0.00142907850167):0.00912203958726,((SN34677:0.0184661774137,SPN22664:0.020463769077):0.00357403593879,(SPN4901:0.0143191577785,((DCC1524:0.00843172918009,(SPN4876:0.00670942150397,SPN4000:0.0101187146242):0.000196466384384):0.0159047203801,((DCC1902:0.00624283246627,PT76:0.00870804014148):0.0133208940831,DCC1738:0.0213326730996):8.79158031339e-7):0.000947327776184):0.000304631260343):0.000324430083021):0):0;
\ No newline at end of file
(PT1175:0.00000001,PT3026:0.00089381,((PT3536:0.01181078,(PT1430:0.00000001,PT582:0.00000001)0.955000:0.00449074)0.858000:0.00262287,(SPN4488:0.01090149,(SN33007:0.02747315,(SPN2906:0.00634729,((SPN13633:0.00716747,SPN22809:0.01194192)0.998000:0.01204819,((SPN4901:0.01190666,(DCC1738:0.01923112,((SPN4000:0.00544987,(DCC1524:0.00636935,SPN4876:0.00547637)0.000000:0.00000006)1.000000:0.01466700,(DCC1902:0.00358991,PT76:0.00545096)1.000000:0.01465500)0.000000:0.00000007)0.884000:0.00180238)0.000000:0.00000005,((SN34677:0.01280399,SPN22664:0.01001080)0.868000:0.00181002,(((S-044:0.01181499,((LMG1250:0.00453078,LMG1435:0.00908673)0.000000:0.00000008,(S-112:0.00633104,(LMG867:0.00000001,LMG869:0.00000001)0.965000:0.00362439)0.000000:0.00000010)0.000000:0.00000007)1.000000:0.01478349,(SN11917:0.00453430,(LMG2302:0.00997503,(DG_23:0.00905341,(BS_06:0.00269611,DG_25:0.00540645)0.000000:0.00000007)0.921000:0.00270734)0.918000:0.00272746)0.751000:0.00087078)0.912000:0.00275645,(29_PMEN2:0.01383740,(((DCC2623:0.00999158,(spnIC116:0.00370268,(spnIC104:0.00000001,((spnIC100:0.00000001,spnIC161:0.00271546)0.000000:0.00000006,(spnIC145:0.00000001,spnIC139:0.00090410)0.000000:0.00000001)0.920000:0.00181251)0.742000:0.00084307)1.000000:0.01572076)0.000000:0.00000006,(SPN4683:0.00818128,(LMG2290:0.01473010,(((SN11927:0.00000001,SPN11926:0.00000001)1.000000:0.01091861,(LMG2050:0.01282455,LMG2062:0.01098551)0.934000:0.00365563)0.866000:0.00180243,((SN26575:0.01091020,(spnSP681:0.00545448,(DCC2613:0.00732490,670-6B :0.00090564)0.000000:0.00000010)0.000000:0.00000007)0.000000:0.00000007,(LMG2888:0.01458221,((spnSP522:0.00362847,((1014-00:0.00995617,(1422-00:0.00632466,(6575-07:0.00000001,LMG90:0.00000001)0.999000:0.00816400)0.000000:0.00000006)0.976000:0.00458261,((K01_071280:0.00542329,((K13_0820:0.01097241,(K13_082:0.00542070,(K13_0940:0.00993589,(K13_0827:0.00456193,(K13_0810:0.00089924,K13_0913:0.00271300)0.859000:0.00179745)0.983000:0.00549210)0.000000:0.00000007)0.000000:0.00000007)0.966000:0.00361314,(K01_071205:0.00548167,K01_071218:0.01097238)0.744000:0.00084622)0.000000:0.00000007)0.944000:0.00271254,(LMG759:0.01457300,(LMG1417:0.00543420,LMG804:0.00359743)0.953000:0.00363207)0.750000:0.00091283)0.877000:0.00181223)0.929000:0.00273158)0.000000:0.00000009,(SPN13522:0.01557059,(SPN3402:0.00457973,(LMG3367:0.01651404,(LMG2230:0.00736795,(LMG2311:0.00634023,LMG2926:0.00817511)0.000000:0.00000010)0.000000:0.00000010)0.996000:0.00823764)0.746000:0.00087508)0.000000:0.00000006)0.807000:0.00090636)0.000000:0.00000008)0.845000:0.00090562)0.000000:0.00000007)0.000000:0.00000005)0.000000:0.00000011)0.000000:0.00000007,(((PT2236:0.00452765,(LMG690:0.00180731,SPN8332:0.00087449)0.999000:0.01368988)0.932000:0.00363030,(LMG1978:0.00728454,PT3104:0.01363239)0.000000:0.00000007)0.869000:0.00180804,(spnIC43:0.00000001,(0001+05003:0.00552484,(spnIC58:0.00000001,(9608+02116:0.00362025,((((9809+25147:0.00089725,(9801+23240:0.00000001,(0009+01095:0.00090088,9907+14172:0.00089971)0.000000:0.00000011)0.795000:0.00090462)0.981000:0.00453146,(spnIC57:0.00000001,((9806+08086:0.00000001,9908+13028:0.00815620)0.811000:0.00090333,(spnIC49:0.00000001,(0211+13275:0.00180601,9611+04103:0.00180049)0.967000:0.00362492)0.000000:0.00000006)0.000000:0.00000006)0.000000:0.00000006)0.000000:0.00000007,(((spnIC19:0.00090247,((9609+24019:0.00090168,9705+05087:0.00000001)0.897000:0.00090268,(9603+12093:0.00361967,9612+28032:0.00451613)0.000000:0.00000006)0.000000:0.00000007)0.845000:0.00090333,(spnIC54:0.00180896,(9708+26128:0.01274924,(spnIC51:0.00090346,(spnIC10:0.00180806,(spnIC195:0.00000001,(spnIC178:0.00000001,(spnIC174:0.00000001,spnIC197:0.00180434)0.000000:0.00000006)0.000000:0.00000007)0.916000:0.00180749)0.000000:0.00000006)0.000000:0.00000006)0.000000:0.00000005)0.000000:0.00000006)0.000000:0.00000006,(((spnIC52:0.00090411,(spnIC210:0.00272668,(0003+13150:0.00361431,9711+04135:0.00180270)0.752000:0.00089712)0.931000:0.00272189)0.779000:0.00090411,((0207+15090:0.00000001,0509+09128:0.00360140)0.987000:0.00452021,(spnIC48:0.00000001,(((0012+25031:0.00089811,(0109+28217:0.00089887,0203+19212:0.00089782)0.000000:0.00000006)0.897000:0.00179987,(spnIC426:0.00000001,(spnIC419:0.00000001,spnIC425:0.00000001)0.930000:0.00090722)0.000000:0.00000001)0.973000:0.00361507,(9906+15160:0.00909767,(spnIC41:0.00091118,(9807+09096:0.00543608,spnIC2:0.00000001)0.000000:0.00000007)0.000000:0.00000011)0.000000:0.00000011)0.845000:0.00090518)0.000000:0.00000006)0.000000:0.00000009)0.000000:0.00000006,(spnIC141:0.00453601,(((9512+07034:0.00181286,(9706+10167:0.00090369,(0108+03050:0.00090263,(9701+10122:0.00000001,(9903+09147:0.00090263,0006+20010:0.00090263)0.000000:0.00000007)0.000000:0.00000006)0.000000:0.00000006)0.887000:0.00180701)0.762000:0.00090448,(spnIC28:0.00090440,(((9803+09178:0.00000001,9808+20015:0.00180317)0.989000:0.00452505,(0212+05159:0.00090207,((0112+27129:0.00000001,0303+13263:0.00090219)0.920000:0.00090207,(9911+18139:0.00180465,(0409+02133:0.00452656,(spnIC463:0.00089378,(0302+20271:0.00450636,(0105+29173:0.00089714,(0208+13020:0.00090487,((0209+24059:0.00000001,0508+26122:0.00720802)0.000000:0.00000006,(0412+17021:0.00000001,0502+25231:0.00089680)0.000000:0.00000001)0.924000:0.00179646)0.000000:0.00000006)0.754000:0.00089695)0.936000:0.00271726)0.945000:0.00271901)0.000000:0.00000006)0.000000:0.00000007)0.000000:0.00000007)0.833000:0.00090247)0.000000:0.00000007,(9811+05053:0.00361123,(0011+09030:0.00452748,9605+07141:0.00271153)0.735000:0.00090078)0.000000:0.00000011)0.835000:0.00090333)0.000000:0.00000006)0.000000:0.00000006,((9601+30166:0.00000001,((0206+21189:0.00272258,(0106+11154:0.00000001,(0301+23540:0.00090041,0501+31089:0.00180804)0.806000:0.00090432)0.796000:0.00089855)0.891000:0.00181768,(spnIC203:0.00271708,((spnIC432:0.01004977,(9703+24150:0.00362610,spnIC176:0.00000001)0.809000:0.00090696)0.000000:0.00000006,(spnIC38:0.00090524,spnIC434:0.00090524)0.000000:0.00000005)0.000000:0.00000007)0.000000:0.00000011)0.000000:0.00000007)0.923000:0.00181134,(SPN13151:0.00271437,(spnIC190:0.00090349,(9602+15128:0.00090000,9607+10105:0.00090269)0.878000:0.00180947)0.791000:0.00090371)0.000000:0.00000001)0.000000:0.00000011)0.000000:0.00000001)0.000000:0.00000001)0.000000:0.00000007)0.000000:0.00000008)0.000000:0.00000001,((spnIC59:0.00000001,(9707+14101:0.00361621,(((9511+06158:0.00000001,9702+03174:0.00090370)0.951000:0.00180749,(0111+21110:0.00636037,(9812+11187:0.00271524,9905+21046:0.00361512)0.874000:0.00180963)0.757000:0.00090286)0.000000:0.00000006,(9912+17151:0.00727673,(0506+29167:0.00090351,(0005+24045:0.00452668,(0503+03063:0.00090363,(0202+01134:0.00090419,(0507+08068:0.00000001,(0407+30157:0.00090376,0505+04001:0.00000001)0.000000:0.00000007)0.897000:0.00181347)0.756000:0.00090419)0.000000:0.00000009)0.000000:0.00000006)0.909000:0.00180803)0.000000:0.00000007)0.000000:0.00000006)0.831000:0.00090333)0.000000:0.00000011,((spnIC6:0.00000001,(9901+13020:0.00272931,(0205+05018:0.00730472,(spnIC187:0.00000001,spnIC192:0.00180918)0.000000:0.00000001)0.880000:0.00181392)0.885000:0.00181016)0.000000:0.00000007,(spnIC55:0.00090333,(spnIC42:0.00000006,((0107+17127:0.00000001,(0101+26271:0.00089942,0102+01171:0.00000001)0.848000:0.00090023)0.841000:0.00090123,(9909+21117:0.00000001,(9712+30001:0.00180378,9802+26112:0.00270279)0.000000:0.00000006)0.000000:0.00000001)0.968000:0.00271089)0.000000:0.00000007)0.000000:0.00000006)0.000000:0.00000001)0.000000:0.00000006)0.000000:0.00000007)0.000000:0.00000007)0.000000:0.00000007)0.000000:0.00000007)0.898000:0.00182908)0.923000:0.00272590)0.000000:0.00000007)0.000000:0.00000012)0.762000:0.00090527)0.767000:0.00090518)0.949000:0.00367331)0.724000:0.00086620)0.000000:0.00000009)0.000000:0.00000011)0.993000:0.00924511)0.999000:0.01283045);
Markdown is supported
0% or
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment